LOC_Os12g44020

Expression Profile

RGAP LOCUS ID LOC_Os12g44020
RAP-DB ID Os12g0637100
Function Ser/Thr protein phosphatase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization extr
score 10

2) CELLO Prediction
localization Extracellular
score 2.314

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPAP10c
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.08
NLS score -0.47
Protein Sequence >LOC_Os12g44020.1 protein
MGMLRWGAHLLLLLLAAATWTCAGAGAGVTSEYRRKLEATVDMPLDADVFRVPPGYNAPQQVHITLGDQTGTAMTVSWVTANELGSNTVRYGSSPEKLDR
AAEGSHTRYDYFNYTSGFIHHCTLTGLTHATKYYYAMGFDHTVRTFSFTTPPKPAPDAPFKFGLIGDLGQTFDSNSTLAHYEANGGDAVLFVGDLSYADN
YPLHDNNRWDTWARFVERSVAYQPWIWTAGNHELDYAPELGETVPFKPFTHRYPTPYRAAGSTEPFWYSVKIASAHVIVLASYSAYGKYTPQWTWLQEEL
ATRVDRKLTPWLIVLMHSPWYNSNNYHYMEGETMRVQFERWLVDAKVDVVLAGHVHSYERSRRFANIDYNIVNGKATPAANVDAPVYITIGDGGNIEGIA
NNFTVPQPAYSAFREASFGHATLEIKNRTHAHYAWHRNHDGAKAVADAVWLTNRYWMPTNDDV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell wall
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Molecular Function
GO Term hydrolase activity
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES