LOC_Os12g43600

Expression Profile

RGAP LOCUS ID LOC_Os12g43600
RAP-DB ID Os12g0632000
Function RNA recognition motif containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 3.593

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.07
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Osgr-rbp4|Osgrp1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.105
NLS score -0.47
Protein Sequence >LOC_Os12g43600.1 protein
MAAPDVEYRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSRRSGGGGGGGYGQR
GGGGGYGGGGGYGGGGGGGYGQRREGGYGGGGGYGGGRGGGGGYGGGYGSRGGGNSDGNWRN

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term RNA binding
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Cellular comBiological Processonent
GO Term peroxisome
7
GO Category Biological Process
GO Term DNA metabolic process
8
GO Category Molecular Function
GO Term DNA binding
9
GO Category Cellular comBiological Processonent
GO Term cytoplasm
10
GO Category Biological Process
GO Term reproduction
11
GO Category Biological Process
GO Term post-embryonic development
12
GO Category Cellular comBiological Processonent
GO Term cytosol
13
GO Category Cellular comBiological Processonent
GO Term plastid
14
GO Category Biological Process
GO Term biological_process
15
GO Category Cellular comBiological Processonent
GO Term nucleus
16
GO Category Cellular comBiological Processonent
GO Term cellular_component
17
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Presence of Splice variants No