LOC_Os12g41380

Expression Profile

RGAP LOCUS ID

LOC_Os12g41380

RAP-DB ID

Os12g0606900

Function

ulp1 protease family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

3.619

3) NUCPRED Prediction

localization

Nuclear

score

0.91

4) Y-Loc Prediction

localization

Nuclear

score

99.59

confidence value

0.88

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsOTS2

Function assigned as per literature

Role in deSUMOylation activity in rice nuclei for salt tolerance.

Subcellular localization as per literature

Nucleus

Cells used for localization experiment

Nicotiana benthamiana leaves

NUCLEAR or Not Nuclear

NUCLEAR

PMID

26869703

Reference of localization

http://www.plantphysiol.org/content/170/4/2378.long

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.132

NLS score

-0.16

Protein Sequence

>LOC_Os12g41380.1 protein
MPIEIDWEEVMPTTTTASSSHGDDVEVRFVSTSTRSSVAQRLRPRGARTEEEAEIVRMRDDELRREMAFAGRLRPRFEGILCDGGEGNRRRRALLEAEAR
RRGIGPAAAKDGDDRHSTSRDVFSFDIEDQLGEDASRRFCGKPWPVSSTKENYGQLGIETRRSSRQIEQRKPISVDKMYSSKPCSSTLSGHKLRVHAIDP
DEKADDEKSEPSTRYSFRNYIKNIAILVIVHEISKIEISRTFNPSNEKCNETFVSLIDLEFIHAQLCVQQGGRKNISRVSLIFKRWVQDVVLLDDEDVQP
EGQVDCRMHDRRNETMIYYPSRDDPEAVELSSSDIKCLDPGVYLSSPVINFYIQYMKRTKLHDDDCREKFYIFNTYFYSKLEEALLGKGEFLKLRRWWKG
VNIYHTSYIILPIHGTAHWSLIIICFPSKESNSGPIILHLDSLELHSSAKIFDTVRRYLEAEWCHLRKNPPPDISISETIWDDLPSNIQKEKVQVPQQKN
EYDCGIFMLYYIERFIRLAPERFTRDNLSMFSRSWFQPEDASDLRQRIRELLLEEFESARLDEALSEADTSDRSDNEEDATKSAESEQAAAAAAPGNGSS
EMIVEGGDTGISNEDIKGVAASKEASSSICRSADNLAGCVLLEEATLSDSVMKDEEDTTKADPVSSQDEQEVAVLSPGAWKNSEENTHKQPQPDICCDSS
DSEMDDVKIIEDPYQRTNKQNCRIF

GO Analysis

GO Category	Cellular comBiological Processonent
GO Term	nucleus

GO Category	Biological Process
GO Term	protein metabolic process

GO Category	Molecular Function
GO Term	hydrolase activity

GO Category	Biological Process
GO Term	response to stress

GO Category	Biological Process
GO Term	response to abiotic stimulus

GO Category	Biological Process
GO Term	protein modification process

GO Category	Biological Process
GO Term	reproduction

GO Category	Biological Process
GO Term	post-embryonic development

Presence of Splice variants