LOC_Os12g40510

Expression Profile

RGAP LOCUS ID LOC_Os12g40510
RAP-DB ID Os12g0597000
Function calcineurin B, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7.5

2) CELLO Prediction
localization Cytoplasmic
score 2.643

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Nuclear
score 82.51
confidence value 0.91
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCBL2
Function assigned as per literature OsCBL2 promotes vacuolation of barley aleurone cells following treatment with gibberellin (GA) and is implicated in vacuole function
Subcellular localization as per literature Tonoplast
Cells used for localization experiment Barley aleurone protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 15980189
Reference of localization http://www.plantphysiol.org/content/138/3/1347.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os12g40510.1 protein
MVQCLDGVRQLLAVVFKCCDLELKQPRGLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLFADRVFDLFDTKHNGI
LGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKN
MTLQYLKDITTTFPSFVFHSQVDDT

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term vacuole
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term binding
5
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No