LOC_Os12g38210

Expression Profile

RGAP LOCUS ID LOC_Os12g38210
RAP-DB ID Os12g0570000
Function spotted leaf 11, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 7

2) CELLO Prediction
localization Nuclear
score 2.385

3) NUCPRED Prediction
localization Non Nuclear
score 0.66

4) Y-Loc Prediction
localization Nuclear
score 99.29
confidence value 0.95
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SPL11
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os12g38210.1 protein
MKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEM
VASGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQ
KMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLS
SSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLC
IYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIM
VPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQSQASAQVPPQATPEQVPENDIPEQLDSPASQYPMVV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to biotic stimulus
6
GO Category Molecular Function
GO Term receptor binding
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No