LOC_Os12g36180

Expression Profile

RGAP LOCUS ID LOC_Os12g36180
RAP-DB ID Os12g0548200
Function auxilin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 3.603

3) NUCPRED Prediction
localization Nuclear
score 0.92

4) Y-Loc Prediction
localization Nuclear
score 99.15
confidence value 0.71
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) XB21
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.162
NLS score 0.61
Protein Sequence >LOC_Os12g36180.1 protein
MDDFQGLLARDFGLRPQGKAAPMSAARAAASSGSAWSNSRSASASSAAAATAPPAPLYDDLFGAAAPSAPPPKAAPSPSLDAIFDSFKEPSAPDAPPKPK
HSSMPVFDKPVYDDDIFDGVPGVKSSSSARFDDVFGGSHAPPPPAYDDLLGGFGSKPEVKEVLPEEKRKPEPAASSAGFDDLIPGFGGRIPMRARETVGT
KDKNVSMSTSKPASMASDPFDVLGTTSTSKHTSSGIFTDPLDELGRPAKSQGKKHDNTAVDSGLFEDSSTFNQVPKSEPLFTSELNDDLKDRNGSTKDRD
SSPVQNFSRKNTTQKPSVENFENIFPKSQSARYSDVHVDIGASGSEKYSGNGMDDQSPRSDESEDEIWLTVSEIPLFTQPTSAPPPSRTPPPLAVKQKPH
GSQAKRKDDNYPRRSNQNHNHHRSSSNQAGSSSIDELEDFAMGKSQSSAYDNANPFNEEEFEHSSSAAASAAAMKEAMDKAEAKFKHAKVVRERERDAKH
RNREQQEQDDEARFNTQDHEERDRQERLEREREMRQREEKEREQRRLEEERELEKQRERERAARQAVERATKEARERAAAEARAKAEREARQRAERAAVQ
RAQKEARERAAVDARERAERAAAEAKERAAAEAKEKVATQARDRAAAERAAVERAQQEARRRAERAAVERAASEARERQAAEARERQAAAAAAAAAAAKE
KQSKPDDLESFFGMGARANSAPKQRAPTADSMFNSQTQNRGAASSASASMRKASSTTNIADDLSAIFGGAPTSSEEFQEIEGESEERRRARFERHQRTRE
RAAKALAEKNERDMQVQREQAERHRISETMDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVKKVYRKATLCIHPDKVQQKGANLQ
QKYVAEKVFDLLKEAWNKFNSEELF

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No