LOC_Os12g33100

Expression Profile

RGAP LOCUS ID LOC_Os12g33100
RAP-DB ID Os12g0515600
Function guanylate kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cysk
score 9

2) CELLO Prediction
localization Nuclear
score 1.528

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Cytoplasm
score 63
confidence value 0.75
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GK1
Function assigned as per literature GK participates in maintenance of the guanine nucleotide pools required for many fundamental cellular processes
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment Root cells of Arabidopsis plant
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 17727616
Reference of localization https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1365-313X.2007.03251.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.47
Protein Sequence >LOC_Os12g33100.1 protein
MGEEAPEFRVESVALESKDCLQNAIDIGDKTYVISRSDDPKSSITIKILDKLTQTWVVPTVLGAPPNPTSSHSAVLVNNEKILIIEKGVPLNDSIWFLEV
DTPFVKQQSKIKGTVVVAWSKGVIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTERSKIEEEISEGKFLEFAHV
HGNVYGTSVEAVESVTDEGKRCILDIDVQGARSVRASSLEAIFIFVCPPSFEELEKRLRARGTETEEQIQKRLRNARAELDQSNSPGLFDHLLVNDDLEA
CYENLKKLLSLDDDHEDSNDSFIKDGKETACYSILSKTNSEILLQSETNEAEKGTTNLLSLDLSLSGGAPGRTRGLKISPVN

GO Analysis
1
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2
GO Category Molecular Function
GO Term kinase activity
Presence of Splice variants No