LOC_Os12g31810

Expression Profile

RGAP LOCUS ID LOC_Os12g31810
RAP-DB ID Os12g0502300
Function cyclin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Nuclear
score 2.881

3) NUCPRED Prediction
localization Non Nuclear
score 0.77

4) Y-Loc Prediction
localization Nuclear
score 93.66
confidence value 0.38
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCYCA2;1
Function assigned as per literature OsCYCA2;1 has role in stomatal developmental pathways
Subcellular localization as per literature Nucleus
Cells used for localization experiment tobacco (N. benthamiana) leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 29701802
Reference of localization http://www.klpmp.net/Uploads/Picture/2018-05-11/5af504a8bd7c5.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.129
NLS score 0.8
Protein Sequence >LOC_Os12g31810.1 protein
MAGRKENPVLTACQAPSGRITRAQAAANRGRFGFAPSVSLPARTERKQTAKGKTKRGALDEITSASTATSAPQPKRRTVLKDVTNIGCANSSKNCTTTSK
LQQKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTSFVIDSKSSEETQKVELLAKAEEPTNLFENEGLLSLQNIERNRDSNCHEAFFEARNAMDKHELAD
SKPGDSSGLGFIDIDNDNGNPQMCASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYIER
QKLQLLGITSMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLAELTLIDYSF
LKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNTSNCPLNAIREKYRQQKFECVANLTSPELGQSLFS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Biological Process
GO Term cell cycle
5
GO Category Molecular Function
GO Term enzyme regulator activity
Presence of Splice variants No