LOC_Os12g30590

Expression Profile

RGAP LOCUS ID LOC_Os12g30590
RAP-DB ID Os12g0489800
Function disease resistance protein RGA2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 2.318

3) NUCPRED Prediction
localization Non Nuclear
score 0.69

4) Y-Loc Prediction
localization Cytoplasm
score 54
confidence value 0.09
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RGA2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.12
NLS score -0.16
Protein Sequence >LOC_Os12g30590.1 protein
MQMRFTKMSWGAAARGIQTATGFVTSVNTWAEFFNCLSSAISSACSWINIHQKPQNDFVKEEIQHLQSDLWQLQTTLPKMRNLVEILEWQIYKKPAAELL
PHIKDALLDAEDIIDEFNYYELKAKIEGRIEECLTSSGCQEFYMSVIRGSFNRVKEIQEKLDHLHRQSMDLGLHCAAQRFDKIVRPETSSFLNSQIFGRQ
EEEKMVLELLGVQLQANAGYKRKRSSRVEVLPIVGLGGVGKTTLAQQICKNQMVKAHFDMILWACVSDDFNAKRLTKEVIQSSKKETSFDNLDSLQSILK
DTVELKRFLLVLDDIWDDVMADGGQDWQRFCAPLSNALQGSMILITTRSQKVADKVRTMDCFPLEGLTEDVFWEFFIVQAFGTESLSKYPDLEDIGRSII
LKLKGSPLAAKTIGRLLRTNLHASH

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term response to stress
Presence of Splice variants No