LOC_Os12g29400

Expression Profile

RGAP LOCUS ID LOC_Os12g29400
RAP-DB ID Os12g0478200
Function GRAM domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 1.776

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Nuclear
score 60.22
confidence value 0.22
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABA45
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.091
NLS score -0.47
Protein Sequence >LOC_Os12g29400.1 protein
MDGKDSTTTPAPAPAPAPAPAPAAEPQTTGNAPPPPPQQQQQQPEAAKWGTRQMGPPAAPGAHPENQQAARWTAARGDQELPPYVIMGEAAAAPPRGRPE
RGDSPMEHILDFFNTWSRKAEELASNIWFNLKTAPSMSDAAMGKLSLGAKALSEGGFDKLYKQTFAGAGADERLRKTFACYLSTATGPVAGTLYLTDRSV
AFCSDRPLSFAAPSGQTAWSYYKVMIPVAKVAAAEPVTMKESPPEKYVHVVTVDSHDFWFMGFVSYDKAVHHLVQAVSSQQRGGAAADTAAAVPGDGK

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No