LOC_Os12g27520

Expression Profile

RGAP LOCUS ID

LOC_Os12g27520

RAP-DB ID

Os12g0460800

Function

serine/threonine-protein kinase AFC2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

cyto

score

2) CELLO Prediction

localization

Nuclear

score

1.621

3) NUCPRED Prediction

localization

Non Nuclear

score

0.62

4) Y-Loc Prediction

localization

Nuclear

score

93.9

confidence value

0.29

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsDR11

Function assigned as per literature

OsDR11S may inhibit the function of OsDR11L at both the transcription and protein kinase activity levels, leading to resistance against Xoo

Subcellular localization as per literature

Nucleus and cytoplasm

Cells used for localization experiment

rice protoplasts

NUCLEAR or Not Nuclear

NUCLEAR

PMID

27621422

Reference of localization

http://www.plantphysiol.org/content/172/3/1959.long

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.147

NLS score

1.2

Protein Sequence

>LOC_Os12g27520.1 protein
MECLAEMPRAPLADRRPRKRQRLGWDVGPEIHQVQIGLCGQEVANVISAVTLGLSSQEIPRFASPPLREDDKDGHFVFAVGDNLTPRYRINAKMGEGTFG
QVLECWDRERKEMVAIKIIRGIKKYRDAAMIEIGMLEQLGKYEKSRSSCVQIRNWFDYRNHICIVCEKLGPSLYDFLRKNSYRSFPIALVREVAKQLLEC
IAFMHELRLIHTDLKPENILLVSPEYIKVPDYKVSSRSPKEGSYFKQLPKSSAIKVIDFGSTTYDQQDQTYVVSTRHYRAPEVILGLGWSYPCDIWSVGC
ILVELCTGEALFQTHENLEHLAMMERVFGPLPCHMLKRADRHSEKYVRKGRLNWPEGCASRDSMKAVMKLPRLQNLVMQNVDHSGGEFIDLLQGLLRYDP
ASRLTAQEALRHPFLREQSERRR

GO Analysis

GO Category	Biological Process
GO Term	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO Category	Biological Process
GO Term	metabolic process

GO Category	Biological Process
GO Term	cellular process

GO Category	Molecular Function
GO Term	kinase activity

GO Category	Molecular Function
GO Term	protein binding

GO Category	Biological Process
GO Term	protein modification process

Presence of Splice variants

YES