LOC_Os12g19549

Expression Profile

RGAP LOCUS ID LOC_Os12g19549
RAP-DB ID Os12g0293100
Function telomerase reverse transcriptase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 7

2) CELLO Prediction
localization Nuclear
score 2.976

3) NUCPRED Prediction
localization Nuclear
score 0.98

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.25
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsTERT
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 9
Number of PAT7 2
Number of Bipartite 3
Basic residues % 0.145
NLS score 4.39
Protein Sequence >LOC_Os12g19549.1 protein
MPRRRRRRRAAPGGQVPPELRLAYGARALTLGRAVFSLLPSPRHCESPCPACRGRVASGCLACRRWEHLLRDGDPVAYRRLITRAVCAIAADDLSAPPPP
RYTPGNSGHSQARLVREMMKSIVADQSHGTKNVLCNGLHEGGQSICISDLVSSSSWSILLHRIGDLLMCYLLRCTSIFLPVKKNDYFQVSGVPLNVVLRN
PIFASTVARKHQPQTTKAKCHTCYLWKSANMAENLSICHDSSNSGVNSSFSSTCKIVTQQSCETCGSIRRAESKDPSEGCNCPKFPSDGRSGECCNCYTH
NTRKRKRLYSWQRRSKKKQVCSVDESSAEWSKLNGSNFNMSNGPSENLAGKMNDQAQSVELTVDNTSLARSNDDSSSEIKVINATILSSEKSPCSVFDIR
GSQGLSCHYSLSEVQYQSTCPQVGPSSYLHLNSCSICFNCIISNASKHLSLDSLISRNGIFYNRRTTYSVFHCKHILSKRKRPDALSLVKHIFGINSCCA
SLLKYNCHESTIRKSNCLCCWLPKSIKNLIRNSKRCQYKKLFLKHCSVKCKVAPDVTKNDGKAHYPPGGKAAYYDRSFSRLEAYSTHQQVASFVWAVLKR
IVPKPLLGNSFGKRSLRTNIWKFIKLRRFETFQLSDCIGDLKVSHYSWLSNIEFSNCFCSAIIGKQTGSSTSAEEQKQKNILHCWISWLFSDIVIPVVRT
YFYVTERESKRYDVFYYPKSVWRDLTSNAIASLNKKNFRILRGEPRKAVRHLNCSSRVRFLPKAKDMRPLVDLRAKSKDANLNKCHLIMKKLRDEKPEMF
GSSVFDYNNVHQNLSQFISSKRSQLMKKLKVYIVVADVSKAFDCVSHDMVLKMIDDAFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIGNGNSIYDLSI
QLSSGGGIFVDQGTICRILKEQFHHLLYEQIKCNILKIGQKYYLQQVGIAQGSKLSPNLCSLYYGHLENSVLSKFLHDSKLNAGEAFSEPEYLLMRFIDD
FIFISFSLEHAQKFLNRMRRGFVFYNCYMNDSKYGFNFCAGNSEPSSNRLYRGDDGVSFMPWSGLLINCETLEIQADYTRYLDITIISTITVKMHSSTKY
IHSKLCHYMRPKCHPIFYDSNINSPGTIRVNIYQAFLLCAMKFHCYIRSVSDANVSKLELLQVIKRTFRYMHSLIVRRMQDVELHYNVRPVLKLRRKETI
WLGLTAYIRVLQQKQSRYKDMLTLLTAELGRYCHLGHECDTLRYAVDDSHSSMFWKFKF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular component organization
5
GO Category Molecular Function
GO Term transferase activity
6
GO Category Biological Process
GO Term DNA metabolic process
7
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants YES