LOC_Os12g16720

Expression Profile

RGAP LOCUS ID LOC_Os12g16720
RAP-DB ID Os12g0268000
Function cytochrome P450 71A1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Chloroplast
score 2.033

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.62
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSL|LLM1
Function assigned as per literature OsSL encodes CYP71P1 in a cytochrome P450 monooxygenase family
Subcellular localization as per literature ER
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 20150424
Reference of localization http://www.jbc.org/content/early/2010/02/11/jbc.M109.091371.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.126
NLS score -0.22
Protein Sequence >LOC_Os12g16720.1 protein
MELTMASTMSLALLVLSAAYVLVALRRSRSSSSKPRRLPPSPPGWPVIGHLHLMSGMPHHALAELARTMRAPLFRMRLGSVPAVVISKPDLARAALTTND
AALASRPHLLSGQFLSFGCSDVTFAPAGPYHRMARRVVVSELLSARRVATYGAVRVKELRRLLAHLTKNTSPAKPVDLSECFLNLANDVLCRVAFGRRFP
HGEGDKLGAVLAEAQDLFAGFTIGDFFPELEPVASTVTGLRRRLKKCLADLREACDVIVDEHISGNRQRIPGDRDEDFVDVLLRVQKSPDLEVPLTDDNL
KALVLDMFVAGTDTTFATLEWVMTELVRHPRILKKAQEEVRRVVGDSGRVEESHLGELHYMRAIIKETFRLHPAVPLLVPRESVAPCTLGGYDIPARTRV
FINTFAMGRDPEIWDNPLEYSPERFESAGGGGEIDLKDPDYKLLPFGGGRRGCPGYTFALATVQVSLASLLYHFEWALPAGVRAEDVNLDETFGLATRKK
EPLFVAVRKSDAYEFKGEELSEV

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Molecular Function
GO Term oxygen binding
Presence of Splice variants No