LOC_Os12g07820

Expression Profile

RGAP LOCUS ID LOC_Os12g07820
RAP-DB ID Os12g0178100
Function OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 7

2) CELLO Prediction
localization Mitochondrial
score 2.233

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.28
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPX6
Function assigned as per literature
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Tobacco By2 cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16397796
Reference of localization https://link.springer.com/article/10.1007/s00425-005-0214-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.126
NLS score -0.47
Protein Sequence >LOC_Os12g07820.1 protein
MAVVHRLLRRGLSAASPLPSLQELGRRPASSSAAAAGDAAAELRGAREDVKQLLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHA
ANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEEAGGPKIPMIYGRVDVAAPEQCPPEGRLPAAGPPSPAEHLREVFYRMGLSDKEIVALSGAHTL
GRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGAKF
DPPKGISLE

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Cellular comBiological Processonent
GO Term mitochondrion
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No