LOC_Os12g06520

Expression Profile

RGAP LOCUS ID LOC_Os12g06520
RAP-DB ID Os12g0162500
Function bZIP transcription factor domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 4.736

3) NUCPRED Prediction
localization Non Nuclear
score 0.64

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 0.99
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category bZIP

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RSG
Function assigned as per literature  RSG is  negatively modulated by 14-3-3 proteins, which is involved in the regulation of endogenous amounts of Gas
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment tobacco mesophyll protoplasts.
NUCLEAR or Not Nuclear NUCLEAR
PMID 11701883
Reference of localization http://www.plantcell.org/content/13/11/2483.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.104
NLS score 0.45
Protein Sequence >LOC_Os12g06520.1 protein
MDGRFPLPPASGGGRGHHRRAHSETFLRLPDADLLLDPEGDFSFSDLDFPSLSDDSPAISDPTPPPPPPMAATPAPAPRPPGGAHMRSLSLDTAFFEGFS
LQGGGGGGGGGGSGGSGGHKRSGSMDGVNSPFEGESALSGGLPDYAKKAMPAERIAELALIDPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTE
ATTLSAQLTLLQRDTSGLTAENRELKLRLQSMEEQAKLRDALNEALREEVQRLKIAAGQAPNMNGNPFNGGLQQQIPPYYTQQQQQQQQMPYLGGHHAQQ
RHPSHQQSSSNGGQSLSGQSLNDSMDFM

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Biological Process
GO Term transport
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term response to extracellular stimulus
8
GO Category Biological Process
GO Term cell communication
9
GO Category Biological Process
GO Term response to stress
10
GO Category Molecular Function
GO Term DNA binding
11
GO Category Biological Process
GO Term cell differentiation
12
GO Category Biological Process
GO Term biological_process
13
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No