LOC_Os12g05440

Expression Profile

RGAP LOCUS ID LOC_Os12g05440
RAP-DB ID Os12g0150200
Function cytochrome P450, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Chloroplast
score 1.89

3) NUCPRED Prediction
localization Non Nuclear
score 0.13

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.36
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CYP94C2b
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.12
NLS score 0.02
Protein Sequence >LOC_Os12g05440.1 protein
MEVELPWGARCAAAAFFVSSLCVAALGVVLLLLRRWPWCGCHVCRAYLAGSWRREFANLGDWYADLLRRSPTGTVHVHVLGCTVTANPANVEYMLKTRFD
NFPKGRPFAALLGDLLGDGIFNVDGDAWRHQRKMASLELGSVAVRSYAYKIVAQEVEARLMPVLANAADSGAVVDLQDVFRRFAFDTICKISFGLDPGCL
DREMPVSELADAFDAASRLSAMRGAAASPLLWKMKRFLNVGSERELKKAIKLIDGLAAAMIRERRKLGVANSHDLLSRFMASSGDDARGAADDKFLRDIV
VSFLLAGRDTVSSALTTLFMILSKNPDVAAAMRAEAGAAAGESAAVSYEHLKRLNYTHAVLYENMRLFPPVQFDSKFCAAADVLPDGTYVDGGARVMYHP
YAMGRMPRIWGADCDAFRPERWLTGAGGAFVPESLFKYPVFQAGLRVCLGKELAITEMKAVSVAVVRAFDVEVVGENGRCGGGAAAAPRFVPGLTASISG
GLPVKIRRV

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Cellular comBiological Processonent
GO Term cell
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term oxygen binding
5
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No