| RGAP LOCUS ID |
LOC_Os12g03970 |
| RAP-DB ID |
Os12g0133500 |
| Function |
CAMK_CAMK_like.44 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
7 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
2.81 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.37 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
52 |
| confidence value |
0.33 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsCPK26 |
| Function assigned as per literature |
OsCPK26 plays a key role in maintaining normal stamen numbers in rice |
| Subcellular localization as per literature |
Nucleus and cytoplasm |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
not available |
| Reference of localization |
https://link.springer.com/article/10.1007/s11105-014-0717-1 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
3 |
| Number of PAT7 |
2 |
| Number of Bipartite |
1 |
| Basic residues % |
0.131 |
| NLS score |
1.92 |
| Protein Sequence |
>LOC_Os12g03970.1 protein
MGQCCTGGGKAVAGDEAEPGTSKAAPPSRGTSSKNGSAKQQPCSPAAKAAATEAAAAASSSKKPAGPIGEVLERPMEEVRTTYSIGKELGRGQFGVTHLC
THKATGEKLACKTIAKRKLANKEDVDDVRREVQIMHHLSGQPNIVDLRGAYEDKHNVHLVMELCAGGELFDRIIARGHYTERAAAALLRAIVGIVHTCHS
MGVIHRDLKPENFLLLSKGDDAPLKATDFGLSVFFKEGEVFRDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYIFLAGVPPFWAESENAIFAAILRGQI
DLASEPWPKISSGAKDLVRKMLNINPKERLTAFQVLNHPWIKEDGDAPDVPLDNVVLNRLKQFRAMNQFKKAALRIIAGCLSEEEIKGLKEMFKNIDKDN
SGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDYEEFVTATVHMNKMDREEHLYTAFQYFDKDNSGYITKEELEQALKEQGLYDANEIKDVI
TDADSNNDGRIDYSEFVAMMRKGSGCAEATNPKKKRRDLVL |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
pollination |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
anatomical structure morphogenesis |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
cellular component organization |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
cell differentiation |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
cell growth |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
kinase activity |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
biosynthetic process |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| 11 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| Presence of Splice variants |
No |
