LOC_Os12g01140

Expression Profile

RGAP LOCUS ID LOC_Os12g01140
RAP-DB ID Os12g0101800
Function AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Nuclear
score 2.324

3) NUCPRED Prediction
localization Nuclear
score 0.84

4) Y-Loc Prediction
localization Nuclear
score 97.25
confidence value 0.04
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) phot1a
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.131
NLS score -0.47
Protein Sequence >LOC_Os12g01140.1 protein
MASKGTEGGHGGVERKEQQQQRGYQLPRDSRGSLEVFNPSSASSFRTAAAAPKSASPFLAIPDREEDNVVAQQRAAEWGLVLQTDHHTGLPQGVSARPSS
GSARTSSEDNPQQQQSAAAIPRVSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGTDPHEIDKIRQSLANGSNYC
GRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQVEVSKYTEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNNTLKRKS
QESLSMSMTEVPSKRSSESGSRRNSRSGTRSSLQKINEVPDQGNRTRKSGLRAFMGFLGMGHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRR
GIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMR
DQKGDVQYFIGVQLDGTEHVQDDAAKEGVVLVKKTADNIDEAAKELPDANLRPEDLWANHSKVVLPNPHMKDTASWRAIQKVLESGESIGLKHFRPVKPL
GSGDTGSVHLVELLNTGEYFAMKAMDKSIMLNRNKVHRATAERQILDLLDHPFLPTLYASFQTKTHICLITDYCPGGELFVLLDNQPLKVLHEDAVRFYA
AEVVVALEYLHCQGIIYRDLKPENILLHRDGHISLTDFDLSCLTSCRPQVFLPEDADEKKGRKNGSYPIFFAEPMRASNSFVGTEEYIAPEIITGAGHTS
AVDWWALGILLYEMLYGYTPFRGKTRQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGINWPLIRATAPPKLEIP
LFSKDDMEKKGLVTNNRTDMF

GO Analysis
1
GO Category Molecular Function
GO Term receptor activity
2
GO Category Molecular Function
GO Term signal transducer activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Biological Process
GO Term signal transduction
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
10
GO Category Biological Process
GO Term cellular component organization
11
GO Category Biological Process
GO Term transport
12
GO Category Molecular Function
GO Term kinase activity
13
GO Category Cellular comBiological Processonent
GO Term vacuole
14
GO Category Biological Process
GO Term protein modification process
15
GO Category Molecular Function
GO Term nucleotide binding
16
GO Category Biological Process
GO Term tropism
Presence of Splice variants YES