LOC_Os12g01010

Expression Profile

RGAP LOCUS ID LOC_Os12g01010
RAP-DB ID Os12g0100100
Function RNA recognition motif containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Nuclear
score 2.004

3) NUCPRED Prediction
localization Non Nuclear
score 0.46

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.7
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRBD1
Function assigned as per literature OsRBD1 confers enhanced stress tolerance in yeast and may play an important role under abiotic stress responses in plants
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion peel epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26870074
Reference of localization https://www.frontiersin.org/articles/10.3389/fpls.2016.00062/full
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.158
NLS score -0.47
Protein Sequence >LOC_Os12g01010.1 protein
MAADSLLDMSLDDLITNKYKRRSRPGPAPSARRSHSRAATRSAAAPYHAITFQAPPTAYVHPTPAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKR
YSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEPPPPAIFGFAAPAGYFDFPPKRGGRGWPRGRGGFGGRGRGHVGRGRGR
GDRGSRKISAEDLDADLDKYHAEGMQMS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Biological Process
GO Term biological_process
4
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No