LOC_Os11g48070

Expression Profile

RGAP LOCUS ID LOC_Os11g48070
RAP-DB ID Os11g0708400
Function GDSL-like lipase/acylhydrolase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.582

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.2
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) WDL1
Function assigned as per literature WDL1 is involved in cutin organization, affecting depolymerizable components
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Rice mesophyll protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 20593223
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-010-9656-x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.47
Protein Sequence >LOC_Os11g48070.1 protein
MLGFAPAPGRPLFVLFGSSIVQFSFSNGGWGAALADIYARKADILLRGYIGWNSRRALQVIDKIFPKDSPVQPSLVIVYFGGNDSVAAHSSGLGPHVPLE
EYIDNMRKIADHLKSLSEKTRVIFLSCPPLNEETLRKSTSTVLSEIVRTNETCRLYSEACVSLCKEMDLKVVDLWNAMQKRDDWATACFTDGLHLSEEGS
KIVVEEILRILKEAEWDPCLHWKAMPTEFGEDSPYDLVSSSGQSTVNPSDWTFHRTIQWD

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants No