LOC_Os11g47760

Expression Profile

RGAP LOCUS ID LOC_Os11g47760
RAP-DB ID Os11g0703900
Function DnaK family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 2.778

3) NUCPRED Prediction
localization Non Nuclear
score 0.25

4) Y-Loc Prediction
localization Cytoplasm
score 82
confidence value 0.43
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HSP70
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.126
NLS score 0.47
Protein Sequence >LOC_Os11g47760.1 protein
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAG
PGDKPMIVVQYKGEEKQFAAEEISSMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKN
VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAAVQAAILSGEGNEKVQDLLLL
DVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKT
TGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDAIDQAIQWLDGNQLAEADEFDD
KMKELEGICNPIIAKMYQGAGADMAGGMDEDDAPPAGGSGAGPKIEEVD

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term extracellular region
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term response to biotic stimulus
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Cellular comBiological Processonent
GO Term nucleolus
10
GO Category Cellular comBiological Processonent
GO Term cytosol
11
GO Category Cellular comBiological Processonent
GO Term plasma membrane
12
GO Category Cellular comBiological Processonent
GO Term plastid
13
GO Category Biological Process
GO Term protein metabolic process
14
GO Category Cellular comBiological Processonent
GO Term nucleus
15
GO Category Cellular comBiological Processonent
GO Term cellular_component
16
GO Category Biological Process
GO Term response to abiotic stimulus
17
GO Category Cellular comBiological Processonent
GO Term vacuole
18
GO Category Biological Process
GO Term biological_process
19
GO Category Cellular comBiological Processonent
GO Term cell wall
20
GO Category Biological Process
GO Term post-embryonic development
21
GO Category Cellular comBiological Processonent
GO Term ribosome
Presence of Splice variants YES