LOC_Os11g37050

Expression Profile

RGAP LOCUS ID LOC_Os11g37050
RAP-DB ID Os11g0579200
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 12

2) CELLO Prediction
localization Nuclear
score 3.497

3) NUCPRED Prediction
localization Non Nuclear
score 0.7

4) Y-Loc Prediction
localization Nuclear
score 92.56
confidence value 0.37
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Pb1
Function assigned as per literature confers durable, broad-spectrum resistance to Magnaporthe oryzae races
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment rice leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 23696671
Reference of localization http://www.pnas.org/content/110/23/9577
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.141
NLS score -0.04
Protein Sequence >LOC_Os11g37050.1 protein
MTELAAGAVSSLLVVIRNEAVLLGGVRDDVQFIKEEMESMNSFLGHLARSAPQGGEHDEQVRTWMNQVRLLAQDCNNCIDLYLYSGNPEIHRAKGRLRRH
LWWVYWSLRKMVAQHRAAIQLRQLKDRARDVGERRLRYGVEIPATTKAAAPDATGGYAAGDDEEEDEDDREGQFAVATPTLAHHSARWPVFEPPSLDDYV
KAKLLEWIEGVPGNAIVTLSIAIVAPDADNKEVLAIAHETLVAPDYYYRRSIMVNVPAVHLDFLPLRPKEVLYYILRELEREEAAGSQKQPTDQGEWEEE
DPDPWQDYYKKCGIYRSKKGVLDKIKRNIKKMNIYEKLDKIKSDIREGQHKSGKLLLLKLQEKGADQVDLHVLLQLLVLQSQQDQAKNKAVDTHKLPEWN
DNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAVRQGGGGERKEDEKDERGDGEEEGKEERRDMEKGEERKEQQQEEQEKEGRKEEQNEVRKETEGRK
EQVAGEEEEKEDHDADNDEDSNDDDDDEEEEEEDDDDEEEPIHLHEDQYEQILREVFTKNASSKAQEQDKLVAEQATKTAATTLDEERIKQMINEAKQDV
LRELRGRETDKNQATGEPDVPPDKNQATGQHAVVLDQNEEAYFEEVEQKIEEIKQELKEQLKIKWIVDKIKHHLQDQCPLIILKFDQMMDGSRWEEIRKA
LSLLELSADALIFTTGSTEQAKGYCYPPREPIDHCSLVGLYYYTVLKLTSKHKNEDNDNAQIFRGILEECEGHEFCMKIFTHAVYANPKRSNEELRKLHS
TLQSPKKSFDTIAKKMFMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIARWVAEGLTFKEDWPSSVYQANRCFDALIRRWLVYPDDISATGKIKSCVV
GDPVHGFITAIARKQHIVETRLSHHLARHFSIFNDLRLRSSDRIGTFFQGLSRSSRVSLLKVLDLEGCQCFASKNQRYLKDICNKMLLLKYLSLKGTDIT
QLPSEINCLRELEVLDIRETKVPANATVNVLLLKLKRLLAGASQIDPTPRNFVTNVRIPSRIDKMINIEVLSNVKAQHHDNLEDIGKLCQLRKLGVVIDG
KKSHLGSLLKAISDLHASLRSLSITIPTTTLEVTPSSPELQDIASRLKHHPEFLESLSISGAKHLFPLLTEGGNKKLAKVTLSNTPLNQDDLKFFAQLPM
LQCVRLRHISCTESVLNFKKDDFKCLKYLLIEGSNLTNITFEDEAACELEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVERIAKLTL
RGTLLKQGDLRIIARELNICCLVLLENSFDISQNQITFEKEEFIWLKLLSVDCSTITKINFITGSAPRLKKIVWSSFTSLSGINNLPRLKELEFNGYSVP
NDVEEAIKNNKSINLKHNKP

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term cell death
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No