LOC_Os11g36430

Expression Profile

RGAP LOCUS ID LOC_Os11g36430
RAP-DB ID Os11g0572500
Function zinc finger, C3HC4 type domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 4.34

3) NUCPRED Prediction
localization Non Nuclear
score 0.38

4) Y-Loc Prediction
localization Nuclear
score 97
confidence value 0.93
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAIR2
Function assigned as per literature OsAIR2 may be associated with the plant response to Arsenic (As) stress and acts as apositive regulator of As stress tolerance
Subcellular localization as per literature Golgi apparatus
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28766720
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/ppl.12607
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.091
NLS score -0.47
Protein Sequence >LOC_Os11g36430.3 protein
MASGTDEKAKMEGLTSAAAFVEGGIQDACDDACSICLEAFCESDPSTLTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTN
QTRNTTIFHHPALGDFEVQHLPVVGNDAELEERILQHLAAAAAMGRSHHLGRREGHRGRSGSHGRPQFLVFSSHPNMPSAGSVSSSSVQGEVDNESSPVH
TTGELSLHANTHEEAGNQSPGMLTYDADQDAVVSSGNSTPVSSPRFFNRRHSTGQSTPVNNDRAGPSDLQSFSDSLKSRLNAVSMKYKESITKSTRGWKE
RLFSRHSSVADLGSEVRREVNAGIASVSRMMERLETRGSNGRTSDGPAISTSEVIPSTESSNERVTENNPTTAATSSGNTSASSAPCVTTTGSN

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term catabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Molecular Function
GO Term binding
6
GO Category Biological Process
GO Term cell cycle
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES