LOC_Os11g34350

Expression Profile

RGAP LOCUS ID LOC_Os11g34350
RAP-DB ID Os11g0546000
Function ATP-binding cassette sub-family E member 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Nuclear
score 1.882

3) NUCPRED Prediction
localization Non Nuclear
score 0.2

4) Y-Loc Prediction
localization Nuclear
score 47.12
confidence value 0.08
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RLI
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.131
NLS score 0.21
Protein Sequence >LOC_Os11g34350.1 protein
MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVP
RPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAEL
CVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPD
TVEGTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQEVINLSGGELQRVAICLCLGKPADIYLIDEPSAYLDSE
QRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYY
YLDD

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No