LOC_Os11g34300

Expression Profile

RGAP LOCUS ID LOC_Os11g34300
RAP-DB ID Os11g0545600
Function chromatin modification-related protein EAF3, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 3.833

3) NUCPRED Prediction
localization Non Nuclear
score 0.75

4) Y-Loc Prediction
localization Nuclear
score 99.93
confidence value 0.99
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) MRG702
Function assigned as per literature MRG702 is a Reader Protein of Trimethylated Histone H3 Lysine 4 and Histone H3 Lysine 36 and Involved in Brassinosteroid-Regulated Growth and Flowering Time Control in Rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Root cells of the transgenic plants
NUCLEAR or Not Nuclear NUCLEAR
PMID 25855537
Reference of localization http://www.plantphysiol.org/content/168/4/1275.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.18
NLS score 0.33
Protein Sequence >LOC_Os11g34300.2 protein
MSQAGSESAAAKEPSFKEGERVLAYHGPLLYEAKVQKSENKEDEWRYHVHYLIFNEYSWDEWVTNDRLLKLTDENIRKQQELEKSQVVDKSVKSGRSAQH
KPKGSNDAKTDKEDTKIIIKGKKRKSQPGGTEEKERKSSESLFMSHFPSTLKKQLVDDWEFVTQLGKLVKLPRSPTVDDILKKYLEHRTKKDNKINDSYA
EILKGLRCYFDKALPAMLLYKKERQQYSEEVKGDVSPSTIYGAEHLLRLFVKLPELLASVNMEEDALNKLQQKLLDILKFLQKNQSSFFLSAYDGGSKGT
DGIKTK

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term chromatin binding
Presence of Splice variants YES