LOC_Os11g30910

Expression Profile

RGAP LOCUS ID LOC_Os11g30910
RAP-DB ID Os11g0505300
Function sulfotransferase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Chloroplast
score 1.42

3) NUCPRED Prediction
localization Non Nuclear
score 0.26

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.14
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSOT1|STV11
Function assigned as per literature STV11 confers durable resistance to rice stripe virus
Subcellular localization as per literature ER and Golgi body
Cells used for localization experiment rice leaf protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25203424
Reference of localization https://www.nature.com/articles/ncomms5768.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.114
NLS score 0.55
Protein Sequence >LOC_Os11g30910.1 protein
MRHKQKTPPCTVHTILASPMAPTSSVHREGGSAAMDMAELIPTLPLETGSPPFPLRQYGGYWLPEWVLPGLEAVHTRFEPRPSDVFLASFPKSGTTWLKA
LAFATINRTTYPPSGDAHPLRHRGPHDCVKFFESTFAISGEGGGGDVDVFAALPSPRAVARPGTCSPPSRRRARLLATHIPYSLLPERITSAAADDGDSG
CRIVYVCRDPKDAFVSMWLFTMSNMVKGVTTTTDEHHPAAAAAAPSIEQVFDLFCDGRSIAGPQWHHVREYWEESRRRPEKVLFLRYEEMLREPARNVER
LAEFLRCPFTAGEVAAGVVDAIVDLCSIDRLRNVQANKTGVTDLAVKKESFFRRGVAGDWSNHMSPEMASRLDRVVEDALRGSGFTFAAAAGDSE

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term response to endogenous stimulus
5
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants No