LOC_Os11g29370

Expression Profile

RGAP LOCUS ID

LOC_Os11g29370

RAP-DB ID

Os11g0484000

Function

haloacid dehalogenase-like hydrolase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

cysk

score

2) CELLO Prediction

localization

Cytoplasmic

score

3.064

3) NUCPRED Prediction

localization

Non Nuclear

score

0.01

4) Y-Loc Prediction

localization

Cytoplasm

score

confidence value

0.99

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsDEP

Function assigned as per literature

Subcellular localization as per literature

Cells used for localization experiment

NUCLEAR or Not Nuclear

PMID

Reference of localization

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.102

NLS score

-0.22

Protein Sequence

>LOC_Os11g29370.1 protein
MACCGGGRGEGAAATESEAYLEGEAVREARELVAELCRHFYGQGWVTGTGGSITVKANDPALPLADQLIVMSPSGVQKERMVAEDMYVLSADGKVLSSPV
SKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSHGMETCIATMLDPGAKEFRMTHMEMIKGIKGHGYRDELVVPIIENTPYEYELTDSLAEAIAAYPKAT
AVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWTTPEHGPINSAKRPRSVLSSSIPNGCPDSKSSKHCVVLDIEGTTTPISFVTDVMFPY
ARDNVRKHLTSTYSSDETKEDIKLLRIQVEEDLKNGIVGSVPIPPDDADKEEVINALVANVESMIKADRKITSLKQLQGHIWRTGFESKELQGVVFDDVP
EALKHWHASGMKVYIYSSGSREAQRLLFGNTAYGDLRQYLCGFFDTTTGNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKSAGFEVIISIRPGN
APLPENHGFRTIKSFSEI

GO Analysis

GO Category	Biological Process
GO Term	metabolic process

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	cellular process

GO Category	Molecular Function
GO Term	catalytic activity

GO Category	Molecular Function
GO Term	binding

GO Category	Molecular Function
GO Term	hydrolase activity

GO Category	Cellular comBiological Processonent
GO Term	cytosol

GO Category	Cellular comBiological Processonent
GO Term	plastid

Presence of Splice variants