LOC_Os11g09280

Expression Profile

RGAP LOCUS ID LOC_Os11g09280
RAP-DB ID Os11g0199200
Function OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization E.R.
score 5

2) CELLO Prediction
localization ER
score 4.641

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.87
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPDIL1;1
Function assigned as per literature OsPDIL1;1 is modulated by osa-miR5144-3p in rice during development and is involved in resistance to abiotic stress.
Subcellular localization as per literature ER
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29194535
Reference of localization https://academic.oup.com/pcp/article-abstract/59/2/331/4673108?redirectedFrom=fulltext
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.47
Protein Sequence >LOC_Os11g09280.1 protein
MAISKAWISLLLALAVVLSAPAARAEEAAAAEEGGDAAAEAVLTLDADGFDEAVAKHPFMVVEFYAPWCGHCKKLAPEYEKAAQELSKHDPPIVLAKVDA
NDEKNKPLATKYEIQGFPTLKIFRNQGKNIQEYKGPREAEGIVEYLKKQVGPASKEIKSPEDATNLIDDKKIYIVGIFSELSGTEYTNFIEVAEKLRSDY
DFGHTLHANHLPRGDAAVERPLVRLFKPFDELVVDSKDFDVTALEKFIDASSTPKVVTFDKNPDNHPYLLKFFQSSAAKAMLFLNFSTGPFESFKSVYYG
AAEEFKDKEIKFLIGDIEASQGAFQYFGLREDQVPLIIIQDGESKKFLKAHVEPDQIVSWLKEYFDGKLSPFRKSEPIPEVNDEPVKVVVADNVHDFVFK
SGKNVLVEFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQGYPTLYFVTPSGKMVPYESGRTADEIVDFIKKNKETAGQAKEKA
ESAPAEPLKDEL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term reproduction
6
GO Category Biological Process
GO Term post-embryonic development
7
GO Category Biological Process
GO Term cell death
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Biological Process
GO Term response to abiotic stimulus
10
GO Category Molecular Function
GO Term catalytic activity
11
GO Category Cellular comBiological Processonent
GO Term plastid
12
GO Category Biological Process
GO Term metabolic process
13
GO Category Cellular comBiological Processonent
GO Term vacuole
14
GO Category Biological Process
GO Term biological_process
15
GO Category Cellular comBiological Processonent
GO Term thylakoid
16
GO Category Cellular comBiological Processonent
GO Term cell wall
17
GO Category Biological Process
GO Term embryo development
Presence of Splice variants YES