LOC_Os11g08210

Expression Profile

RGAP LOCUS ID LOC_Os11g08210
RAP-DB ID Os11g0184900
Function no apical meristem protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Chloroplast
score 1.412

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Cytoplasm
score 81
confidence value 0.41
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category NAC

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNAC5
Function assigned as per literature OsNAC5 regulates stress-inducible genes and stress tolerance in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Root cells transgenic plants
NUCLEAR or Not Nuclear NUCLEAR
PMID 20632034
Reference of localization https://link.springer.com/article/10.1007%2Fs00438-010-0557-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.04
Protein Sequence >LOC_Os11g08210.1 protein
MECGGALQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVG
SPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYDTVDAGEDVKPAAAAAAAKGGRIGGGG
GAAAMKVELSDYGFYDQEPESEMLCFDRSGSADRDSMPRLHTDSSGSEHVLSPSPSPDDFPGGGDHDYAESQPSGGCGGWPGVDWAAVGDDGFVIDSSLF
ELPSPAAFSRAAGDGAAFGDMFTYLQKPF

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Biological Process
GO Term signal transduction
7
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No