LOC_Os11g07850

Expression Profile

RGAP LOCUS ID LOC_Os11g07850
RAP-DB ID Os11g0180200
Function Protein-tyrosine phosphatase domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 1.436

3) NUCPRED Prediction
localization Non Nuclear
score 0.42

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.39
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPTP2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.127
NLS score -0.16
Protein Sequence >LOC_Os11g07850.1 protein
MASSATGTDRTSSHLTRLKKKKEKATKKKGNGKAANNTGSPHRDMYAPFLTLSWGYITVFFMSLTPYNDHIQDIQTAFQTGKFTAAQNPANREKNRYSDV
MPFDETRVRLKPSASDHPSSNEYINASLIETDDQGQSHTKFISTQGPLVKTFGDFWQMVYENQCPVIVMVTKFDGAKCDRYLPTNEGEERDYGKFSVKIT
KFKCDGVLELRGLEVQQNELRDFPRLGPAWKSGFWPNHAIGQYTVKFAHDLCSMHSKYSVYDYDLFAWFPNSILQVRHVLHILYSDWPDHGVPHDSAFVR
KILKRLYGIPKEHPIVAHCSAGIGRTGAYITIHNTIERILLGDMSALDLSKTVKKFRSQRPGMVQTEEQSVPWVSLTDCRPSTPSIL

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Molecular Function
GO Term hydrolase activity
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No