LOC_Os11g07040

Expression Profile

RGAP LOCUS ID LOC_Os11g07040
RAP-DB ID Os11g0171500
Function CAMK_CAMK_like.43 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Cytoplasmic
score 3.049

3) NUCPRED Prediction
localization Non Nuclear
score 0.31

4) Y-Loc Prediction
localization Cytoplasm
score 63
confidence value 0.52
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCPK24|OsCDPK14
Function assigned as per literature OsCDPK14 positively regulate ABA response by modulating the expression of ABA‐responsive genes in rice
Subcellular localization as per literature cytoplasm and nucleus
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 27627618
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/pce.12829
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.111
NLS score 0.21
Protein Sequence >LOC_Os11g07040.1 protein
MQPDPSGSGGDGNANAKAKLAPPPVTAAGGRPVSVLPHKTANVRDHYRIGKKLGQGQFGTTYLCVDKASGGEFACKSIPKRKLLCREDYEDVWREIQIMH
HLSEHPNVVRIRGAYEDALFVHIVMELCAGGELFDRIVAKGHYTERAAAQLIRTIVAVVEGCHSLGVMHRDLKPENFLFASAAEDAPLKATDFGLSMFYK
PGDKFSDVVGSPYYVAPEVLQKCYGPESDVWSAGVILYILLCGVPPFWAETEAGIFRQILRGKLDFESEPWPSISDSAKDLVRNMLCRDPTKRLTAHEVL
CHPWIVDDAVAPDKPIDSAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIGGLKELFKMIDTDDSGTITFDELKEGLKRVGSELTEHEIQALMEAADIDN
SGTIDYGEFIAATLHMNKLEREENLVSAFSFFDKDGSGFITIDELSQACREFGLDDLHLEDMIKDVDQNNDGQIDYSEFTAMMRKGNAGGAGRRTMRNSL
QLNLGEILNPSNS

GO Analysis
1
GO Category Biological Process
GO Term response to endogenous stimulus
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Cellular comBiological Processonent
GO Term cytosol
6
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No