| RGAP LOCUS ID |
LOC_Os11g06750 |
| RAP-DB ID |
Os11g0168200 |
| Function |
ribosomal protein L3, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
5 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
4.174 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.46 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
49 |
| confidence value |
0.11 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRML1 |
| Function assigned as per literature |
RML1 regulates leaf morphology and plant architecture in rice |
| Subcellular localization as per literature |
Cytosol and nucleus |
| Cells used for localization experiment |
Nicotiana benthamiana leaves |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
27241493 |
| Reference of localization |
https://academic.oup.com/jxb/article/67/11/3457/2197692 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
2 |
| Number of PAT7 |
2 |
| Number of Bipartite |
0 |
| Basic residues % |
0.208 |
| NLS score |
1.84 |
| Protein Sequence |
>LOC_Os11g06750.1 protein
MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLR
SLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYK
FFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT
EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
ribosome |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 5 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
vacuole |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cell wall |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleolus |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
translation |
|
| 9 |
| GO Category |
Molecular Function |
| GO Term |
structural molecule activity |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| 11 |
| GO Category |
Biological Process |
| GO Term |
reproduction |
|
| 12 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 13 |
| GO Category |
Biological Process |
| GO Term |
embryo development |
|
| Presence of Splice variants |
No |
