LOC_Os11g06720
| RGAP LOCUS ID | LOC_Os11g06720 |
| RAP-DB ID | Os11g0167800 |
| Function | abscisic stress-ripening, putative, expressed |
Sub-cellular Localization Predictions |
|
1) WoLF-PSORT Prediction |
|
| localization | mito |
| score | 6 |
2) CELLO Prediction |
|
| localization | Nuclear |
| score | 2.96 |
3) NUCPRED Prediction |
|
| localization | Non Nuclear |
| score | 0.06 |
4) Y-Loc Prediction |
|
| localization | Nuclear |
| score | 96.39 |
| confidence value | 0.91 |
| Number Of Software Predicting Nucleus | 2 |
| Seed Specific | No |
| Transcription factor category | |
Experimental evidence for subcellular localization |
|
| Published gene name (updated 1 January 2020) | ASR5|OsAsr1|OsASR2 |
| Function assigned as per literature | ASR5 protein acts as a transcription factor to regulate the expression of different genes that collectively protect rice cells from Al-induced stress responses |
| Subcellular localization as per literature | Chloroplast in rice protoplast, and in rice embryogenic calli localization in nucleus and cytoplasm |
| Cells used for localization experiment | |
| NUCLEAR or Not Nuclear | NUCLEAR |
| PMID | 22676236 |
| Reference of localization | https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-3040.2012.02553.x |
| Is Subcellular localization evidence by author available ? | No |
Sequence Analysis |
|
| Number of PAT4 | 0 |
| Number of PAT7 | 0 |
| Number of Bipartite | 0 |
| Basic residues % | 0.145 |
| NLS score | -0.47 |
| Protein Sequence | >LOC_Os11g06720.1 protein MAEEKHHHHLFHHKKDDEPATGVDSYGEGVYTSETVTTEVVAGGQDEYERYKKEEKQHKHKQHLGEAGALAAGAFALYEKHEAKKDPENAHRHKITEEIA ATAAVGAGGYAFHEHHEKKKDHKSAEESTGEKKHHLFG |
GO Analysis |
|
| Presence of Splice variants | No |