LOC_Os11g05640

Expression Profile

RGAP LOCUS ID LOC_Os11g05640
RAP-DB ID Os11g0154900
Function bZIP transcription factor domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 11

2) CELLO Prediction
localization Nuclear
score 4.058

3) NUCPRED Prediction
localization Nuclear
score 0.81

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 1
Number Of Software Predicting Nucleus 4
Seed Specific Yes
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZIP-2a|OsbZIP80
Function assigned as per literature
Subcellular localization as per literature Nuclear and cytoplasm
Cells used for localization experiment Tobacco leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID
Reference of localization RSNP-DB
Is Subcellular localization evidence by author available ? Yes
Image

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.109
NLS score 0.65
Protein Sequence >LOC_Os11g05640.1 protein
MSDHSSSDGQRQCRRRGVGVDVELDAAMALADMAGAAPGQPEASPPPHATQEAAAAAVAKGEQEDEAEMASTRLSLELGKVGIQSSPPCSSSSSAGHPAM
QPAAAATAAPGYGPRPRHMLTEAEKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKEKDVVMQEYLSLKETNKQLKEQVAIRTIKK
AAVAEPMDTAPPAQQQAETAAAVAPPTTATPPSTAPQPSFLYTAAPAGVAPVPYVWGSWPPCGPTGYEPPPPLCLPPCAWYYPVVADPRVSSPPTSTYPQ
SYQEQPTSSPGGGTAEEDTDDDPCSLTLAIDVDKRSAPGAGGSAAGAGQHASISDREKATAAAEARKRRKELTKLKQMHGGGGGSRPGGGGEHW

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No