LOC_Os11g04104

Expression Profile

RGAP LOCUS ID LOC_Os11g04104
RAP-DB ID Os11g0135900
Function major facilitator superfamily antiporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 9

2) CELLO Prediction
localization PlasmaMembrane
score 4.969

3) NUCPRED Prediction
localization Non Nuclear
score 0.25

4) Y-Loc Prediction
localization Nuclear
score 73.81
confidence value 0.14
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) TOM3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.075
NLS score -0.47
Protein Sequence >LOC_Os11g04104.3 protein
MGDHGRRRQAEAAAPLLEKKGSTGTGEGDGSCIEGCPGCVVDRRKAASSGIPYGSFLFVWIVTLCTALPISSLFPFLYFMIRDLHVAKRTEDIGFYAGFV
GASFMFGRCLTSTIWGIAADRIGRKPVVVFGIFAVVIFNTLFGLSFTYWMAIATRFLLGALNGLLGPIKAYAIEVCRPEHEALALSLVSTAWGIGLIIGP
AIGGYLSQPAEKFPNVFSPDSLFARFPYFLPCLCISVFAAVVLIGCIWMPETLHKHKADANRSQTVEALESHLIDPEEKADQNGSLDCKKSLLSNWPLMS
SIILYCVFSFHDMAYTEIFSLWAESDRKYGGLSLSSEDVGQVLAITGASLLVYQLFIYPRINKVIGHIKASRIAAILCIPILFAYPYMTYLSGPGLTIIL
NIASVIKNNLGVTIITGCFILQNNAVPQDQRGAANGLAMTGMSFFKAVAPAGAGIVFSWAQKRQQASFLPGDQMVFFLLNLFELLGLILTFKPFLAVPQQ
HDTN

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants YES