LOC_Os11g03370

Expression Profile

RGAP LOCUS ID LOC_Os11g03370
RAP-DB ID Os11g0127600
Function no apical meristem protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12.5

2) CELLO Prediction
localization Nuclear
score 2.526

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Nuclear
score 99.89
confidence value 0.91
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category NAC

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ONAC045
Function assigned as per literature ONAC045 encodes a novel stress-responsive NAC transcription factor which play an important role in abiotic stress response
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 19135985
Reference of localization https://www.sciencedirect.com/science/article/pii/S0006291X09000060?via%3Dihub
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.47
Protein Sequence >LOC_Os11g03370.1 protein
MVETSTSLVKLEQDGSLFLPPGFRFHPTDAEVILSYLLQKFLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYW
KATGKDREIFNLQPTSYGGSSNNKNNKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNDNPNLRLNLKDEWVVCKVFHKKGDDREAINKQQAQA
AAVDQYSAGTPNNGSSVEAGDDDDDLFQLDSIIDPSIYFSNSSAANILSAPPNMSNSVVAANYGASTTTTGTASAGSFQQQPNYCSLINKSISSSNVSSW
NNMPPPPPVAEGGVHGIGSSYSLQHQAAMVKALRDVIRLPNPLGMPQYKLDDAYLWDSS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No