LOC_Os10g41430

Expression Profile

RGAP LOCUS ID LOC_Os10g41430
RAP-DB ID Os10g0563900
Function cyclin, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Extracellular
score 1.196

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Cytoplasm
score 50
confidence value 0.08
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CYCU4;1|OsCYCP4;1
Function assigned as per literature CYC U4;1 mediates BR-regulated cell division to control leaf erectness
Subcellular localization as per literature CYC U4;1 can strongly interact with AtBIN2 in nucleus and cytoplasm
Cells used for localization experiment Tobacco leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26190148
Reference of localization https://www.sciencedirect.com/science/article/pii/S153458071500355X?via%3Dihub#mmc1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.075
NLS score -0.22
Protein Sequence >LOC_Os10g41430.1 protein
MRTGEVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVH
RLLITSVLTAVKFVDDICYNNAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEMTYLEQPPAVDLPRLHCCPSDQDDAGCHHKQQQ
QQQQQQQHQLAV

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants No