LOC_Os10g41310

Expression Profile

RGAP LOCUS ID LOC_Os10g41310
RAP-DB ID Os10g0562700
Function DUF630/DUF632 domains containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 13

2) CELLO Prediction
localization Nuclear
score 3.175

3) NUCPRED Prediction
localization Nuclear
score 0.92

4) Y-Loc Prediction
localization Nuclear
score 99.4
confidence value 0.85
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) REL2
Function assigned as per literature REL2 is the DUF domains contained protein which involves in the control of leaf rolling in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment tobacco leaves and tobacco protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27473144
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-016-0105-6
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.134
NLS score 0.83
Protein Sequence >LOC_Os10g41310.1 protein
MGCTASKVEQEDTVRRCKERRRHMKEAVASRQQLASAHADYLRSLRLTAAALSRFAQGHPSLAVSHHTAPVLLTTAAPALAPTPTPPPPSSTASSSLPPP
TPLLPKHQQAPPPPPPTQSHQPPPPVAVRAPRGGPRRLKVPHILSDSSVASPARSSFRKPVVGTPSSSSAWDWENFYPPSPPDSEFFDRRKADLEEANRL
RELEEEEKARGYLHPHHLKEEDEVDDDDDEREEEMHCGGWEDDDDHYASTTTSETRSEEGEMGNRSECGFAARSEYGGTAPSEYAAAPLPLPLRRRDERS
EAGDSSSTVTAAAEMRMVIRHRTLAEIVAAIEEYFVKAAEAGNGVSELLEASRAQLDRNFRQLKKTVYHSNSLLSSLSSTWTSKPPLAVRYKLDTNALEM
ESMEGKSHGSTLERLLAWEKKLYQEVKARESVKIEHEKKLSTLQSLEYRGRDSTKLDKTKASINKLQSLIIVTSQAATTTSSAIVRVRDNELAPQLVELC
FALLSMWRSMNHFHEIQNEIVQQVRGLVDNSMAESTSDLHRLATRDLEAAVSAWHSNFNRLIKYQRDYIRALYGWLKLTLFQVDSNIPQEAYTSLISREL
TTFCDEWKQALDRLPDASASEAIKSFVNVVHVIYTKQAEEMKIKKRTETYSKELEKKTNSLRAIEKKYYQSYSMVGLGLPGSGRDGIESHSFDARDPLAE
KKTEIAQCRRKVEDEMTRHAKAVEVTRSMTLNNIQTGLPGMFQAIAGFSGTVVEALDVVCRRAGSVR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term DNA binding
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No