LOC_Os10g40960

Expression Profile

RGAP LOCUS ID LOC_Os10g40960
RAP-DB ID Os10g0558900
Function oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8.5

2) CELLO Prediction
localization Cytoplasmic
score 1.623

3) NUCPRED Prediction
localization Non Nuclear
score 0

4) Y-Loc Prediction
localization Cytoplasm
score 93
confidence value 0.49
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RL14
Function assigned as per literature RL14 gene affects water transport in leaves by affecting the composition of the secondary cell wall
Subcellular localization as per literature cytoplasm
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 22329407
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/j.1467-7652.2012.00679.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.124
NLS score -0.47
Protein Sequence >LOC_Os10g40960.1 protein
MNYYPPCLKADKVLGLSPHTDPGGLTLLLQVNDVQGLQINKDGKWFSVNALNGALIVNIGDTLEILSNGKFRSVEHRAVVHPSRERISAALFYYPCQDMV
ISPLPDFVKDGKVKYKTISYQDLLTEYFTAELDGRNRLKKMKLEP

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No