LOC_Os10g39670

Expression Profile

RGAP LOCUS ID LOC_Os10g39670
RAP-DB ID Os10g0542800
Function protein kinase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 2.892

3) NUCPRED Prediction
localization Non Nuclear
score 0.66

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.52
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBSK1-2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.123
NLS score 0.49
Protein Sequence >LOC_Os10g39670.1 protein
MGCCGSSLRVGSHAPEKPPRRARPPPPPPQPHHPRRPSFTLNAHQAAASSSAASAAPAPAFAEFSLAELREATGGFAAANIVSESGEKAPNLVYRGRLQG
AGGGGRAIAVKKFGKLAWPDPKQFAEEARGVGKLRHRRMANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENKAIEWAMRLRVAYNIAEALEYCSNEER
PLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTLESVVFSFGTILIDLLSGKRIPPTLALDMIRSRSIQAIMETNLEGK
YSIEEATTLVDLASKCLQYEPRDRPDIKKLVSILQPLQTKSEVPSYVMLGVPKPEEVPKAPPAPQHPLSPMGEACSRMDLTAIHQILVSTHYRDDEGTNE
LSFQEWTQQMRDMLDARKRGDFAFRDKNFKQAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWPTAFYMQAVALSKLNMQSD
SLDMLNEASQLEEKRQKSIKGP

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Biological Process
GO Term biosynthetic process
7
GO Category Biological Process
GO Term protein modification process
8
GO Category Molecular Function
GO Term kinase activity
9
GO Category Biological Process
GO Term response to endogenous stimulus
10
GO Category Biological Process
GO Term signal transduction
11
GO Category Molecular Function
GO Term binding
12
GO Category Cellular comBiological Processonent
GO Term vacuole
13
GO Category Molecular Function
GO Term protein binding
14
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No