LOC_Os10g38950

Expression Profile

RGAP LOCUS ID LOC_Os10g38950
RAP-DB ID Os10g0533600
Function CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Cytoplasmic
score 2.002

3) NUCPRED Prediction
localization Non Nuclear
score 0.3

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.14
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMPK6|OsMPK4
Function assigned as per literature OsMPK6 negatively regulates systemic acquired resistance (SAR)
Subcellular localization as per literature Nucleus
Cells used for localization experiment onion (Allium cepa) epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 20663089
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-313X.2010.04306.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.109
NLS score -0.47
Protein Sequence >LOC_Os10g38950.1 protein
MDSSSGGAGGGGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHE
NIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIADFGLARTTTETDLM
TEYVVTRWYRAPELLLNCSQYTAAIDVWSVGCILGEIVTRQPLFPGRDYIQQLKLITELIGSPDDSSLGFLRSDNARRYMKQLPQYPRQDFRLRFRNMSA
GAVDLLEKMLVFDPSRRITVDEALHHPYLASLHDINEEPTCPAPFSFDFEQPSFTEEHIKELIWRESLAFNPDPPY

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term response to biotic stimulus
5
GO Category Biological Process
GO Term response to stress
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Biological Process
GO Term response to abiotic stimulus
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Cellular comBiological Processonent
GO Term cytosol
10
GO Category Molecular Function
GO Term kinase activity
11
GO Category Molecular Function
GO Term signal transducer activity
12
GO Category Cellular comBiological Processonent
GO Term nucleus
13
GO Category Biological Process
GO Term signal transduction
14
GO Category Biological Process
GO Term protein modification process
15
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants No