LOC_Os10g38060

Expression Profile

RGAP LOCUS ID LOC_Os10g38060
RAP-DB ID Os10g0524400
Function phospholipase D, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 2.62

3) NUCPRED Prediction
localization Non Nuclear
score 0.52

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.07
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLDbeta1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.093
NLS score 0.09
Protein Sequence >LOC_Os10g38060.2 protein
MEGGNHGGGGYPYPPPQQYPYPYGQYPYQYPPPQQQPPPPSAYLSPSRSFHGYPSAPPPQPQPQPYAHHSAPLQPYPPPPQHHAYPPPQPHPPSPYVYDP
YHAPAAAYPSYPSPNPSPSISPSSSFHHHPEPPSPSPSAPSYPSIADGLANMHVSDRHDYPPPPSPAAVPAASSPSVLPPSASFPGGGSSHGGGGMQMVP
YGPPAGGSQHGGMQMVAYGSPAGGSQHGSVRPSLKVVLLHGTLDVWVYDARNLPNKDLFSKRVGDLLGPRLIGAVGSKMSSANMTSDPYVTIQVSYATVA
RTYVVPNNENPVWTQNFLVPVGHDAAEVEFVVKDNDVFGAQLIGTVSIPAEKLLFGERINGIYDVLESNGKPCAQGAVLRLSIQYIPVAQLKMYHHGVIA
GPDSLGVPNTYFPMRRGNRVTLYQDAHVPDGCLPDFCLDHGMRYQHGQCWRDIYDAICQARRLIYIVGWSVFHTIHLIREGVEKMPSLGELLKMKSQEGV
RVLLLVWDDPTSRSILGIKTDGFMGTRDEETRRFFKHSSVQVLLCPRSAGKRHSWVKQQETGTIFTHHQKTVILDADAGNHKRKIIAFVGGLDLCGGRYD
TPSHPLFRSLQTVHKEDYYNPNFATVDARGPREPWHDLHSKIDGPAAYDVLQNFQERWLKASKRHGIKKLGKSYDDALLSIERIPDFISINDAIYFSDND
PETWHVQVFRSIDSNSAKGFPKDPREATRKNLVCGKNVLIDMSIHTAYVNAIRGAQHFIYIENQYFIGSSFNWDSNKDIGANNLIPIEIALKIANKIKAK
ERFSAYIVIPMWPEGNPTGAPTQRILYWQHKTMQMMYETIYRALKEEGLDDLYEPQDYLNFFCLGNREVADSPSTSNSTSTPQEQARKHRRFMVYVHSKG
MIVDDEYVIIGSANINQRSMEGIRDTEIAMGAYQPQYTWASKVSAPRGQIYGYRMSLWAEHIGVVEEGFNYPETMECMRRVRQIGEQNWERFVDNEVTEM
RGHLMKYPVSVDRKGKVKPLPGCTSFPDMGGNICGSFRAIQENLTI

GO Analysis
1
GO Category Molecular Function
GO Term hydrolase activity
2
GO Category Biological Process
GO Term biological_process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term protein binding
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Molecular Function
GO Term lipid binding
7
GO Category Biological Process
GO Term response to stress
8
GO Category Biological Process
GO Term response to biotic stimulus
Presence of Splice variants YES