LOC_Os10g38050

Expression Profile

RGAP LOCUS ID LOC_Os10g38050
RAP-DB ID Os10g0524500
Function HOTHEAD precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 1.404

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 6
confidence value 0.11
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNP1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.089
NLS score -0.47
Protein Sequence >LOC_Os10g38050.1 protein
MAALGRASSSAPVLAAAAAVLLSLCLAALSEEQEQLENLRFVRHAQDAPLVSSYNYIVIGGGTAGCPLAATLSEHSRVLLLERGGLPYANMSSEQHFTDA
LADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRASNEYVRASGWDARLVNSSYRWVERSLVFRPDVPPWQAALRDALLEVGVTPDNGFTFDHV
TGTKIGGTIFDNSGQRHTAADFLRHARPRGLTVLLYATVSRILFKSQDGVPYPVAYGVVFSDPLGVQHRVYLRDGDKNEVIVSAGTLGSPQLLMLSGVGP
QAHLEAHGIEVIVDQPMVGQGVADNPMNSVFIPSPVPVELSLVQVVGITRSGSFIEGVSGSEFGMPVSDGALRWARSFGMLSPQTGQLGTLPPKQRTPEA
LQRAAEAMMRLDRRAFRGGFILEKILGPVSSGHVELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSNFTYANASVESIFTDSANFPVN
LLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYRVFGVQGLRVIDSSTFKYSPGTNPQATVMMLGRYMGVKIQSERWKK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term binding
Presence of Splice variants No