LOC_Os10g38040

Expression Profile

RGAP LOCUS ID LOC_Os10g38040
RAP-DB ID Os10g0524300
Function lysM domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Mitochondrial
score 1.09

3) NUCPRED Prediction
localization Non Nuclear
score 0.24

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.17
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsEMSA1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.13
NLS score 0.15
Protein Sequence >LOC_Os10g38040.1 protein
MAMAGESRRRRRAAAEAVAWCLALGVVALLLVGSVEKEEEVVVVRGARLAAARPCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI
TPRPGRRN

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Biological Process
GO Term catabolic process
Presence of Splice variants No