LOC_Os10g37340

Expression Profile

RGAP LOCUS ID LOC_Os10g37340
RAP-DB ID Os10g0517500
Function cystathionine gamma-synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Nuclear
score 1.075

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.38
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RRJ1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.097
NLS score -0.04
Protein Sequence >LOC_Os10g37340.1 protein
MAHVMAASELVTATIKRPFQNDDDNSSNGNGNADGKPKARRREADPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFSGELGPERGDLYIYS
RHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLMQLVGAGGHVVASRCLYGGTHALLSRFLPRASGVRATFVDADDEAAVRAAVRPGETRVVYVET
MSNPTLAVADIPMLARVAHDAGAKLVVDNTFTPMVVSPARLGADVVVHSVSKFISGGADIIAGAICGPASLVNAMMDLQEGALMLLGPTMNAKVAFELSE
RLPHLPLRMQEHSRRAAEYASRMRRLGLRVAYPGLPDHPHHARLLAIANPGYGAGGMLCVDMGTEDRANRLMHHLQNTTRFGLMAVSLGYYETLMSCSGS
STSSEMPPEDRARAGISPGLVRMSVGYNGTLEQRWAQFERALSLMQQQQQQHPDRDAAAKYCKV

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term cytosol
5
GO Category Biological Process
GO Term catabolic process
Presence of Splice variants No