LOC_Os10g36400

Expression Profile

RGAP LOCUS ID LOC_Os10g36400
RAP-DB ID Os10g0508100
Function GIL1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.108

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 97
confidence value 0.89
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GFR1
Function assigned as per literature GFR1 is involved in grain-filling in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31519786
Reference of localization http://www.plantphysiol.org/content/181/3/1207.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os10g36400.1 protein
MLQKFALAFKTKTIEFFAEEEEDEDADGGVSAAAAAAVGVGEGGVLAGQRVVVLKPDTVQSPNPSGGVGVGVVVGEAAAVEAALATASSFQAAYLHLQAA
HAPFLPDAAAAADAAAVSHLRRLSEVKRLARDPGVGGGALTAHLEAQVRENQALLRSFDAVVNRLQAALDGKDAAAASLRRDHAELADGNARLGARLDRA
LAPPPGAGGDDALGAMLSAGVFDSVLRDALRVAHRFTRSLADLLRCAGWDLAAAAAAVYPGVAYSRPGHCRYALLSRVCLSMFDGFDSYQFGGSTDATTL
EGIDLAIRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLGVAGPLYELFVAMASSIWTLHRLAWAYDPAVG
IFQIGQGAEYSVVYMENIVRSKGFSGSKELGKMMRPKVGFTVVPGFRLGGTVIQCRVYLDCGKREGIIGE

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No