LOC_Os10g35370

Expression Profile

RGAP LOCUS ID LOC_Os10g35370
RAP-DB ID Os10g0496900
Function oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Chloroplast
score 3.778

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.87
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPORB|FGL
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.109
NLS score -0.13
Protein Sequence >LOC_Os10g35370.1 protein
MALQAATTTSFLPSALSARKEGAVKDSAFLGVRLGDGLKLETSALGLRTKRVSTSSVAIRAQASAAVSSPTVTPASPSGKQTLRKGTAVITGASSGLGLA
TAKALAETGRWHVVMGCRDFLKASRAAKAAGMEKGSYTIVHLDLASLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQPSFTADGFEMSVGVNHLGHF
LLARELLADLTSSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLDGVSSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFA
SLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLADH
DQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Cellular comBiological Processonent
GO Term plastid
3
GO Category Cellular comBiological Processonent
GO Term thylakoid
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES