LOC_Os10g34180

Expression Profile

RGAP LOCUS ID LOC_Os10g34180
RAP-DB ID Os10g0483000
Function transcription factor BTF3, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization Nuclear
score 2.969

3) NUCPRED Prediction
localization Non Nuclear
score 0.31

4) Y-Loc Prediction
localization Nuclear
score 99.85
confidence value 0.85
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBTF3|Osj10gBTF3
Function assigned as per literature OsBTF3 results in significant plant miniaturization and typical pollen abortion
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment eaf tissue of N. benthamiana
NUCLEAR or Not Nuclear NUCLEAR
PMID 23147221
Reference of localization https://academic.oup.com/pcp/article/53/12/2073/1869686
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.146
NLS score 0.15
Protein Sequence >LOC_Os10g34180.1 protein
MNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSI
INQLGPDNLDNLRRLAEQFQKQAPGASGEEAGASAGAAQGDDDDVPELVPGETFEEAAEEKKES

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants YES