LOC_Os10g32920

Expression Profile

RGAP LOCUS ID LOC_Os10g32920
RAP-DB ID Os10g0466700
Function ribosomal protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Mitochondrial
score 1.911

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.41
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HLL
Function assigned as per literature HLL is essential for normal ovule development
Subcellular localization as per literature Mitochondria
Cells used for localization experiment Arabidopsis root cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 11752383
Reference of localization http://www.plantcell.org/content/13/12/2719.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 2
Basic residues % 0.186
NLS score 1.29
Protein Sequence >LOC_Os10g32920.1 protein
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFED
NAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term ribosome
2
GO Category Biological Process
GO Term translation
3
GO Category Molecular Function
GO Term structural molecule activity
Presence of Splice variants No