LOC_Os10g28060

Expression Profile

RGAP LOCUS ID LOC_Os10g28060
RAP-DB ID Os10g0416200
Function 3-ketoacyl-CoA synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Mitochondrial
score 1.857

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.64
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ONI2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.117
NLS score -0.47
Protein Sequence >LOC_Os10g28060.1 protein
MDRELVRTVKLATKNHAGVLFRRAVRHLPHIVAVTALVAAAPRLSTLLAAAAAGGSTMRWARALWSDLAGELGPSAPALAVACWAAALAAYTYAASRPRP
VYLIDLAGYKAPREHEASRAKTIAHFGRCGRFSGESMAFQKRMLERSGLGEATHFPTSLISLPVDMCLRTAREESHAVIFGVVDEVLRKSGVAAADVGVL
IFNSSLLSPTPSFTSLIVNRYGMRPGVVSHNLSGMGCSAGIIAIDLAKRLLQVHENTYALVVSTENITLNAYMGNNRPMLVTNTLFRVGGAAILLSNRAA
DRRGRAKYQLIHTVRTHRGAHDQSFGCVTQEEDDAGEVGVSLSKELMVVAGEALKTNITTLGPLVLPISEQLRFLATVVLKRVFRADVKAYLPDFKLALD
HFCIHAGGRGVLDELEKSLKLSPWDMEPSRMTLYRFGNTSSSSLWYELAYCEAKGRIKRGDRVWQIAFGSGFKCNSAVWRALRTVDAAGLDAGDNPWMKE
VDMLPVDVPKVAPIDETSYQIPN

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants No